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Commit 64a7ba68 authored by Boris Martin's avatar Boris Martin
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new jobs

parent d5f0879b
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1 merge request!6Draft: "Flexible acquisition", a configuration with arbitrary sources and receivers read from a YAML file.
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input/boris/monaco_study/gen_slurm.py
+ 18
− 16
View file @ 64a7ba68
from string import Template
import os
all_files = [filename for filename in os.listdir() if filename.startswith('config_') and filename.endswith('.txt')]
all_files.sort()
freq_files = [filename for filename in os.listdir() if filename.startswith('config_') and filename.endswith('.txt')]
freq_files.sort()
yaml_files = ["shots.yml", "shots_merged_receivers.yml"]
slurm_template = '''#!/bin/bash
#SBATCH --job-name=$job_name
......@@ -10,7 +11,7 @@ slurm_template = '''#!/bin/bash
#SBATCH --error=$error
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=1
#SBATCH --time=05:00:00
#SBATCH --time=12:00:00
set -e
set -x
......@@ -18,17 +19,18 @@ set -x
$command_line
'''
for i, freq in enumerate(all_files):
synth_job = Template(slurm_template).substitute(job_name="synth_{}".format(i),
output="synth_{}.out".format(i),
error="synth_{}.err".format(i),
command_line="~/fwi/build/synthetics synthetics.txt common.txt {} -verbose 2".format(freq))
with open('synth_{}.slurm'.format(i), 'w') as f:
f.write(synth_job)
job_id = 1
for yaml_file in yaml_files:
for freq_file in freq_files:
synth_inv_command_line = ("~/Bureau/gmsh/fwi/build/synthetics synthetics.txt common.txt {} -shots_config {} -verbose 2\n"
"~/Bureau/gmsh/fwi/build/inversion inversion.txt common.txt localminimum_ncg.txt innerproduct_sst.txt {} -shots_config {} -verbose 2"
).format(freq_file, yaml_file, freq_file, yaml_file)
inv_job = Template(slurm_template).substitute(job_name="inv_{}".format(i),
output="inv_{}.out".format(i),
error="inv_{}.err".format(i),
command_line="~/fwi/build/inversion inversion.txt common.txt localminimum_ncg.txt innerproduct_sst.txt {} -verbose 2".format(freq))
with open('inv_{}.slurm'.format(i), 'w') as f:
f.write(inv_job)
synth_inv_job = Template(slurm_template).substitute(job_name="synth_inv_{}".format(job_id),
output="synth_inv_{}.out".format(job_id),
error="synth_inv_{}.err".format(job_id),
command_line=synth_inv_command_line)
with open('synth_inv_{}.slurm'.format(job_id), 'w') as f:
f.write(synth_inv_job)
job_id += 1
input/boris/monaco_study/shots_merged_receivers.py 0 → 100644
+ 120
− 0
View file @ 64a7ba68
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shots:
- emitters: [0]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [7]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [14]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [21]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [28]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [35]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [42]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [49]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [56]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [63]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [70]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [77]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
- emitters: [84]
receivers: [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51, 52, 53, 54, 55, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 69, 71, 72, 73, 74, 75, 76, 78, 79, 80, 81, 82, 83, 85, 86, 87, 88, 89, 90]
\ No newline at end of file
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