- replaced old Makefiles/configure system with CMake

- moved GUI to FlGui + added experimental QGui to test Qt

- fixed most MSVC and gcc compiler warnings

- converted some remaining tabs to whitespace (that's why the patch is
  so large; please try to remember to indent with 2 spaces and not
  tabs when you commit stuff to CVS)

- merged modified patch from Konstantinos Poulios to allow saving
  physical/partition as element tags in mesh formats that don't
  support them natively