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meshGRegionLocalMeshMod.cpp
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meshGRegionLocalMeshMod.cpp 37.37 KiB
// Gmsh - Copyright (C) 1997-2014 C. Geuzaine, J.-F. Remacle
//
// See the LICENSE.txt file for license information. Please report all
// bugs and problems to the public mailing list <gmsh@geuz.org>.
#include "meshGRegionLocalMeshMod.h"
#include "GEntity.h"
#include "GRegion.h"
#include "GmshMessage.h"
#include "Numeric.h"
static int edges[6][2] = {{0,1},{0,2},{0,3},{1,2},{1,3},{2,3}};
static int efaces[6][2] = {{0,2},{0,1},{1,2},{0,3},{2,3},{1,3}};
//static int enofaces[6][2] = {{1,3},{2,3},{0,3},{1,2},{0,1},{0,2}};
//static int facesXedges[4][3] = {{0,1,3},{1,2,5},{0,2,4},{3,4,5}};
static int faces[4][3] = {{0,1,2},{0,2,3},{0,1,3},{1,2,3}};
static int vnofaces[4] = {3,1,2,0};
static int vFac[4][3] = {{0,1,2},{0,2,3},{0,1,3},{1,2,3}};
// as input, we give a tet and an edge, as return, we get
// all tets that share this edge and all vertices that are
// forming the outer ring of the cavity
// we return true if the cavity is closed and false if it is open
void computeNeighboringTetsOfACavity(const std::vector<MTet4*> &cavity,
std::vector<MTet4*> &outside)
{
outside.clear();
for (unsigned int i = 0; i < cavity.size(); i++){
for (int j = 0; j < 4; j++){
MTet4 * neigh = cavity[i]->getNeigh(j);
if(neigh){
bool found = false;
for (unsigned int k = 0; k < outside.size(); k++){
if(outside[k] == neigh){
found = true;
break;
}
}
if(!found){
for (unsigned int k = 0; k < cavity.size(); k++){
if(cavity[k] == neigh){
found = true;
}
}
}
if(!found)outside.push_back(neigh);
}
}
}
}
bool buildEdgeCavity(MTet4 *t, int iLocalEdge, MVertex **v1, MVertex **v2,
std::vector<MTet4*> &cavity, std::vector<MTet4*> &outside,
std::vector<MVertex*> &ring)
{
cavity.clear();
ring.clear();
*v1 = t->tet()->getVertex(edges[iLocalEdge][0]);
*v2 = t->tet()->getVertex(edges[iLocalEdge][1]);
// the 5 - i th edge contains the other 2 points of the tet
MVertex *lastinring = t->tet()->getVertex(edges[5 - iLocalEdge][0]);
ring.push_back(lastinring);
cavity.push_back(t);
while (1){
MVertex *ov1 = t->tet()->getVertex(edges[5 - iLocalEdge][0]);
MVertex *ov2 = t->tet()->getVertex(edges[5 - iLocalEdge][1]); // printf("edge %d %d tet %d %d %d %d\n",(*v1)->getNum(),(*v2)->getNum(),
// t->tet()->getVertex(0)->getNum(),
// t->tet()->getVertex(1)->getNum(),
// t->tet()->getVertex(2)->getNum(),
// t->tet()->getVertex(3)->getNum());
int K = ov1 == lastinring ? 1 : 0;
lastinring = ov1 == lastinring ? ov2 : ov1;
// look in the 2 faces sharing this edge the one that has vertex
// ov2 i.e. edges[5-iLocalEdge][1]
int iFace;
int iFace1 = efaces[iLocalEdge][0];
int iFace2 = efaces[iLocalEdge][1];
if (faces[iFace1][0] == edges[5-iLocalEdge][K] ||
faces[iFace1][1] == edges[5-iLocalEdge][K] ||
faces[iFace1][2] == edges[5-iLocalEdge][K] ) iFace = iFace1;
else if (faces[iFace2][0] == edges[5-iLocalEdge][K] ||
faces[iFace2][1] == edges[5-iLocalEdge][K] ||
faces[iFace2][2] == edges[5-iLocalEdge][K] ) iFace = iFace2;
else { Msg::Error("Error of connexion"); return false; }
t=t->getNeigh(iFace);
if (!t) return false;
if (t->isDeleted()){ Msg::Error("Weird!!"); return false; }
if (t == cavity[0]) break;
ring.push_back(lastinring);
cavity.push_back(t);
iLocalEdge = -1;
for (int i = 0; i < 6; i++){
MVertex *a = t->tet()->getVertex(edges[i][0]);
MVertex *b = t->tet()->getVertex(edges[i][1]);
if ((a == *v1 && b == *v2) || (a == *v2 && b == *v1)){
iLocalEdge = i;
break;
}
}
if (iLocalEdge == -1){
Msg::Error("loc = %d", iLocalEdge);
return false;
}
// FIXME when hybrid mesh, this loops for ever
if (cavity.size() > 1000) return false;
// printf("%d %d\n",ITER++, cavity.size());
}
computeNeighboringTetsOfACavity (cavity,outside);
return true;
}
typedef struct {
int nbr_triangles ; /* number of different triangles */
int (*triangles)[3] ; /* triangles array */
int nbr_trianguls ; /* number of different triangulations */
int nbr_triangles_2 ; /* number of triangles / triangulation */
int (*trianguls)[5] ; /* retriangulations array */
} SwapPattern ;
void BuildSwapPattern3(SwapPattern *sc)
{
static int trgl[][3] = { {0,1,2} };
static int trgul[][5] = { {0,-1,-1,-1,-1} };
sc->nbr_triangles = 1 ;
sc->nbr_triangles_2 = 1 ;
sc->nbr_trianguls = 1 ;
sc->triangles = trgl ;
sc->trianguls = trgul ;
}
void BuildSwapPattern4(SwapPattern *sc)
{
static int trgl[][3] =
{ {0,1,2}, {0,2,3}, {0,1,3}, {1,2,3} }; static int trgul[][5] =
{ {0,1,-1,-1,-1}, {2,3,-1,-1,-1} };
sc->nbr_triangles = 4 ;
sc->nbr_triangles_2 = 2 ;
sc->nbr_trianguls = 2 ;
sc->triangles = trgl ;
sc->trianguls = trgul ;
}
void BuildSwapPattern5(SwapPattern *sc)
{
static int trgl[][3] =
{ {0,1,2}, {0,2,3}, {0,3,4}, {0,1,4}, {1,3,4},
{1,2,3}, {2,3,4}, {0,2,4}, {0,1,3}, {1,2,4} };
static int trgul[][5] =
{ {0,1,2,-1,-1}, {3,4,5,-1,-1}, {0,6,7,-1,-1}, {2,5,8,-1,-1}, {3,6,9,-1,-1} };
sc->nbr_triangles = 10 ;
sc->nbr_triangles_2 = 3 ;
sc->nbr_trianguls = 5 ;
sc->triangles = trgl ;
sc->trianguls = trgul ;
}
void BuildSwapPattern6(SwapPattern *sc)
{
static int trgl[][3] =
{ {0,1,2}, {0,2,3}, {0,3,4}, {0,4,5}, {0,2,5}, {2,4,5}, {2,3,4}, {0,3,5},
{3,4,5}, {0,2,4}, {2,3,5}, {1,2,3}, {0,1,3}, {0,1,5}, {1,4,5}, {1,3,4},
{0,1,4}, {1,3,5}, {1,2,4}, {1,2,5} };
static int trgul[][5] =
{ {0,1,2,3,-1}, {0,4,5,6,-1}, {0,1,7,8,-1}, {0,3,6,9,-1}, {0,4,8,10,-1},
{2,3,11,12,-1}, {11,13,14,15,-1}, {7,8,11,12,-1}, {3,11,15,16,-1},
{8,11,13,17,-1}, {6,13,14,18,-1}, {3,6,16,18,-1}, {5,6,13,19,-1},
{8,10,13,19,-1} };
sc->nbr_triangles = 20 ;
sc->nbr_triangles_2 = 4 ;
sc->nbr_trianguls = 14 ;
sc->triangles = trgl ;
sc->trianguls = trgul ;
}
void BuildSwapPattern7(SwapPattern *sc)
{
static int trgl[][3] =
{ {0,1,2}, {0,2,3}, {0,3,4}, {0,4,5}, {0,5,6}, {0,3,6}, {3,5,6}, {3,4,5}, {0,4,6},
{4,5,6}, {0,3,5}, {3,4,6}, {0,2,4}, {2,3,4}, {0,2,6}, {2,5,6}, {2,4,5}, {0,2,5},
{2,4,6}, {2,3,5}, {2,3,6}, {0,1,3}, {1,2,3}, {0,1,4}, {1,3,4}, {0,1,6}, {1,5,6},
{1,4,5}, {0,1,5}, {1,4,6}, {1,3,5}, {1,3,6}, {1,2,4}, {1,2,5}, {1,2,6} };
static int trgul[][5] =
{ {0,1,2,3,4}, {0,1,5,6,7}, {0,1,2,8,9}, {0,1,4,7,10}, {0,1,5,9,11}, {0,3,4,12,13},
{0,13,14,15,16}, {0,8,9,12,13}, {0,4,13,16,17}, {0,9,13,14,18}, {0,7,14,15,19},
{0,4,7,17,19}, {0,6,7,14,20}, {0,9,11,14,20}, {2,3,4,21,22}, {5,6,7,21,22},
{2,8,9,21,22}, {4,7,10,21,22}, {5,9,11,21,22}, {3,4,22,23,24}, {22,24,25,26,27},
{8,9,22,23,24}, {4,22,24,27,28}, {9,22,24,25,29}, {7,22,25,26,30}, {4,7,22,28,30},
{6,7,22,25,31}, {9,11,22,25,31}, {3,4,13,23,32}, {13,25,26,27,32}, {8,9,13,23,32},
{4,13,27,28,32}, {9,13,25,29,32}, {13,16,25,26,33}, {4,13,16,28,33},
{13,15,16,25,34}, {9,13,18,25,34}, {7,19,25,26,33}, {4,7,19,28,33},
{7,15,19,25,34}, {6,7,20,25,34}, {9,11,20,25,34} };
sc->nbr_triangles = 35 ;
sc->nbr_triangles_2 = 5 ;
sc->nbr_trianguls = 42 ;
sc->triangles = trgl ;
sc->trianguls = trgul ;
}
bool edgeSwap(std::vector<MTet4 *> &newTets, MTet4 *tet,
int iLocalEdge,
const qmTetrahedron::Measures &cr)
{
std::vector<MTet4*> cavity;
std::vector<MTet4*> outside;
std::vector<MVertex*> ring;
MVertex *v1, *v2;
// printf("a\n");
bool closed = buildEdgeCavity(tet, iLocalEdge, &v1, &v2, cavity, outside, ring);
// printf("b\n");
if (!closed) return false;
double volumeRef = 0.0;
double tetQualityRef = 1;
for(unsigned int i = 0; i < cavity.size(); i++){
double vol = fabs(cavity[i]->tet()->getVolume());
tetQualityRef = std::min(tetQualityRef,cavity[i]->getQuality());
volumeRef += vol;
}
// build swap patterns
SwapPattern sp;
switch (ring.size()){
case 3 : BuildSwapPattern3(&sp); break;
case 4 : BuildSwapPattern4(&sp); break;
case 5 : BuildSwapPattern5(&sp); break;
case 6 : BuildSwapPattern6(&sp); break;
case 7 : BuildSwapPattern7(&sp); break;
default : return false;
}
// compute qualities of all tets that appear in the patterns
double tetQuality1[100], tetQuality2[100];
double volume1[100], volume2[100];
for (int i = 0; i < sp.nbr_triangles; i++){
int p1 = sp.triangles[i][0];
int p2 = sp.triangles[i][1];
int p3 = sp.triangles[i][2];
tetQuality1[i] = qmTetrahedron::qm(ring[p1], ring[p2], ring[p3], v1, cr, &(volume1[i]));
tetQuality2[i] = qmTetrahedron::qm(ring[p1], ring[p2], ring[p3], v2, cr, &(volume2[i]));
}
// look for the best triangulation, i.e. the one that maximize the
// minimum element quality
double minQuality[100];
// for all triangulations
for (int i = 0; i < sp.nbr_trianguls; i++){
// for all triangles in a triangulation
minQuality[i] = 1;
double volume = 0;
for (int j = 0; j < sp.nbr_triangles_2; j++){
int iT = sp.trianguls[i][j];
minQuality[i] = std::min(minQuality[i], tetQuality1[iT]);
minQuality[i] = std::min(minQuality[i], tetQuality2[iT]);
volume += (volume1[iT] + volume2[iT]);
}
// printf("config %3d qual %12.5E volume %12.5E\n",i,minQuality[i],volume);
if (fabs(volume-volumeRef) > 1.e-10 * (volume+volumeRef)) minQuality[i] = -1;
}
int iBest = 0;
double best = -1.0;
for (int i = 0; i < sp.nbr_trianguls; i++){
if(minQuality[i] > best){
best = minQuality[i];
iBest = i; }
}
// if there exist no swap that enhance the quality
if (best <= tetQualityRef) return false;
// we have the best configuration, so we swap
// printf("outside size = %d\n",outside.size());
// printf("a swap with %d tets reconnect %d tets cavity %d tets\n",
// ring.size(),outside.size(),cavity.size());
for (int j = 0; j < sp.nbr_triangles_2; j++){
int iT = sp.trianguls[iBest][j];
int p1 = sp.triangles[iT][0];
int p2 = sp.triangles[iT][1];
int p3 = sp.triangles[iT][2];
MVertex *pv1 = ring[p1];
MVertex *pv2 = ring[p2];
MVertex *pv3 = ring[p3];
MTetrahedron *tr1 = new MTetrahedron(pv1, pv2, pv3, v1);
MTetrahedron *tr2 = new MTetrahedron (pv3, pv2, pv1, v2);
MTet4 *t41 = new MTet4(tr1, tetQuality1[iT]);
MTet4 *t42 = new MTet4(tr2, tetQuality2[iT]);
t41->setOnWhat(cavity[0]->onWhat());
t42->setOnWhat(cavity[0]->onWhat());
outside.push_back(t41);
outside.push_back(t42);
newTets.push_back(t41);
newTets.push_back(t42);
}
for(unsigned int i = 0; i < cavity.size(); i++) cavity[i]->setDeleted(true);
connectTets(outside);
return true;
}
bool edgeSplit(std::vector<MTet4 *> &newTets, MTet4 *tet, MVertex *newVertex,
int iLocalEdge, const qmTetrahedron::Measures &cr)
{
std::vector<MTet4*> cavity;
std::vector<MTet4*> outside;
std::vector<MVertex*> ring;
MVertex *v1, *v2;
bool closed = buildEdgeCavity(tet, iLocalEdge, &v1, &v2, cavity, outside, ring);
if (!closed) return false;
for(unsigned int j = 0; j < ring.size(); j++){
MVertex *pv1 = ring[j];
MVertex *pv2 = ring[(j + 1) % ring.size()];
MTetrahedron *tr1 = new MTetrahedron(pv1, pv2, newVertex, v1);
MTetrahedron *tr2 = new MTetrahedron(newVertex, pv2, pv1, v2);
MTet4 *t41 = new MTet4(tr1, cr);
MTet4 *t42 = new MTet4(tr2, cr);
t41->setOnWhat(cavity[0]->onWhat());
t42->setOnWhat(cavity[0]->onWhat());
outside.push_back(t41);
outside.push_back(t42);
newTets.push_back(t41);
newTets.push_back(t42);
}
for(unsigned int i = 0; i < cavity.size(); i++) cavity[i]->setDeleted(true);
connectTets(outside);
return true;}
// swap a face i.e. remove a face shared by 2 tets
bool faceSwap(std::vector<MTet4 *> &newTets, MTet4 *t1, int iLocalFace,
const qmTetrahedron::Measures &cr)
{
MTet4 *t2 = t1->getNeigh(iLocalFace);
if (!t2) return false;
if (t1->onWhat() != t2->onWhat()) return false;
MVertex *v1 = t1->tet()->getVertex(vnofaces[iLocalFace]);
MVertex *f1 = t1->tet()->getVertex(faces[iLocalFace][0]);
MVertex *f2 = t1->tet()->getVertex(faces[iLocalFace][1]);
MVertex *f3 = t1->tet()->getVertex(faces[iLocalFace][2]);
MVertex *v2 = 0;
for (int i = 0; i < 4; i++){
MVertex *v = t2->tet()->getVertex(i);
if (v != f1 && v != f2 && v != f3){
v2 = v;
break;
}
}
if (!v2){
Msg::Error("Impossible to swap face");
return false;
}
// printf("%p %p -- %p %p %p\n",v1,v2,f1,f2,f3);
double vol1 = fabs(t1->tet()->getVolume());
double q1 = t1->getQuality();
double vol2 = fabs(t2->tet()->getVolume());
double q2 = t2->getQuality();
double vol3;
double q3 = qmTetrahedron::qm(f1, f2, v1, v2, cr, &vol3);
double vol4;
double q4 = qmTetrahedron::qm(f2, f3, v1, v2, cr, &vol4);
double vol5;
double q5 = qmTetrahedron::qm(f3, f1, v1, v2, cr, &vol5);
if (fabs(vol1 + vol2 - vol3 - vol4 - vol5) > 1.e-10 * (vol1 + vol2)) return false;
if (std::min(q1, q2) > std::min(std::min(q3, q4), q5)) return false;
// printf("%g %g %g\n",vol1 + vol2, vol3 + vol4 + vol5,vol1 + vol2 - vol3 - vol4 - vol5);
// printf("qs = %g %g vs %g %g %g\n",q1,q2,q3,q4,q5);
std::vector<MTet4*> outside;
for(int i = 0; i < 4; i++){
if(t1->getNeigh(i) && t1->getNeigh(i) != t2){
bool found = false;
for(unsigned int j = 0; j < outside.size(); j++){
if(outside[j] == t1->getNeigh(i)) { found = true; break; }
}
if(!found) outside.push_back(t1->getNeigh(i));
}
}
for(int i = 0; i < 4; i++){
if(t2->getNeigh(i) && t2->getNeigh(i) != t1){
bool found = false;
for(unsigned int j = 0; j < outside.size(); j++){
if(outside[j] == t2->getNeigh(i)) { found = true; break; }
}
if(!found) outside.push_back(t2->getNeigh(i));
}
}
// printf("we have a face swap %d\n",outside.size());
t1->setDeleted(true); t2->setDeleted(true);
MTetrahedron *tr1 = new MTetrahedron(f1, f2, v1, v2);
MTetrahedron *tr2 = new MTetrahedron(f2, f3, v1, v2);
MTetrahedron *tr3 = new MTetrahedron(f3, f1, v1, v2);
MTet4 *t41 = new MTet4(tr1, q3);
MTet4 *t42 = new MTet4(tr2, q4);
MTet4 *t43 = new MTet4(tr3, q5);
t41->setOnWhat(t1->onWhat());
t42->setOnWhat(t1->onWhat());
t43->setOnWhat(t1->onWhat());
outside.push_back(t41);
outside.push_back(t42);
outside.push_back(t43);
newTets.push_back(t41);
newTets.push_back(t42);
newTets.push_back(t43);
connectTets(outside);
return true;
}
void buildVertexCavity_recur(MTet4 *t, MVertex *v, std::vector<MTet4*> &cavity)
{
// if (recur > 20)printf("oufti %d\n",recur);
if(t->isDeleted()){
Msg::Fatal("a deleted triangle is a neighbor of a non deleted triangle");
}
int iV = -1;
for (int i = 0; i < 4; i++){
if (t->tet()->getVertex(i) == v){
iV = i;
break;
}
}
if (iV == -1){
Msg::Error("Trying to build a cavity of tets for a vertex that does not "
"belong to this tet");
return;
}
for (int i = 0; i < 3; i++){
MTet4 *neigh = t->getNeigh(vFac[iV][i]);
if (neigh){
bool found = false;
for(unsigned int j = 0; j < cavity.size(); j++){
if(cavity[j] == neigh){
found = true;
j = cavity.size();
}
}
if(!found){
cavity.push_back(neigh);
buildVertexCavity_recur(neigh, v, cavity);
}
}
}
}
// sliver removal by compound mesh modif postulate : the edge cannot
// be swopped so we split it, and then collapse the new vertex on
// another one (of course, not the other one on the unswappable edge)
// after that crap, the sliver is trashed
bool sliverRemoval(std::vector<MTet4*> &newTets, MTet4 *t,
const qmTetrahedron::Measures &cr)
{
std::vector<MTet4*> cavity;
std::vector<MTet4*> outside;
std::vector<MVertex*> ring;
MVertex *v1, *v2;
bool isClosed[6];
int nbSwappable = 0;
int iSwappable = 0;
for (int i = 0; i < 6; i++){
isClosed[i] = buildEdgeCavity(t, i, &v1, &v2, cavity, outside, ring);
if (isClosed[i]){
nbSwappable++;
iSwappable = i;
}
}
if (nbSwappable == 0){
// all edges are on model edges or model faces, which means that
// nothing can be done
return false;
}
else if (nbSwappable == 1){
// classical case, the sliver has 5 edges on the boundary
// try to swap first
if (edgeSwap(newTets,t,iSwappable,qmTetrahedron::QMTET_ETA))return true;
// if it does not work, split, smooth and collapse
MVertex *v1 = t->tet()->getVertex(edges[iSwappable][0]);
MVertex *v2 = t->tet()->getVertex(edges[iSwappable][1]);
MVertex *newv = new MVertex (0.5 * (v1->x() + v2->x()),
0.5 * (v1->y() + v2->y()),
0.5 * (v1->z() + v2->z()), t->onWhat());
t->onWhat()->mesh_vertices.push_back(newv);
if (!edgeSplit(newTets, t, newv, iSwappable, qmTetrahedron::QMTET_ONE)) return false;
for (int i = 0; i < 4; i++){
if (newTets[newTets.size() - 1]->tet()->getVertex(i) == newv){
smoothVertex(newTets[newTets.size() - 1], i, cr);
smoothVertexOptimize(newTets[newTets.size() - 1], i, cr);
}
}
for (unsigned int i = 0; i < newTets.size(); i++){
MTet4 *new_t = newTets[i];
if (!(new_t->isDeleted())){
for (int j = 0; j < 6; j++){
MVertex *va = new_t->tet()->getVertex(edges[j][0]);
MVertex *vb = new_t->tet()->getVertex(edges[j][1]);
if (va == newv &&
(va != v1 && vb != v1 && va != v2 && vb != v2)){
collapseVertex(newTets,new_t,edges[j][0],edges[j][1],cr);
}
else if (vb == newv &&
(va != v1 && vb != v1 && va != v2 && vb != v2)){
collapseVertex(newTets,new_t,edges[j][1],edges[j][0],cr);
}
}
}
}
return true;
}
else{
for (int i = 0; i < 4; i++){
smoothVertex(t, i, cr);
smoothVertexOptimize(t, i, cr);
}
}
return false;
}
bool collapseVertex(std::vector<MTet4 *> &newTets,
MTet4 *t,
int iVertex,
int iTarget,
const qmTetrahedron::Measures &cr,
const localMeshModAction action, double *minQual)
{
if(t->isDeleted()){
Msg::Error("Impossible to collapse vertex");
return false;
}
MVertex *v = t->tet()->getVertex(iVertex);
MVertex *tg = t->tet()->getVertex(iTarget);
if(v->onWhat()->dim() < 3) return false;
if(tg->onWhat()->dim() < 3) return false;
std::vector<MTet4*> cavity_v;
std::vector<MTet4*> outside;
cavity_v.push_back(t);
buildVertexCavity_recur(t, v, cavity_v);
std::vector<MTet4*> toDelete;
std::vector<MTet4*> toUpdate;
double volume = 0;
double worst = 1.0;
for(unsigned int i = 0; i < cavity_v.size(); i++){
bool found = false;
volume += fabs(cavity_v[i]->tet()->getVolume());
double q = cavity_v[i]->getQuality();
worst = std::min(worst,q);
for (int j = 0; j < 4; j++){
if (cavity_v[i]->tet()->getVertex(j) == tg)found=true;
}
if (found) toDelete.push_back(cavity_v[i]);
else toUpdate.push_back(cavity_v[i]);
}
double x = v->x();
double y = v->y();
double z = v->z();
v->x() = tg->x();
v->y() = tg->y();
v->z() = tg->z();
double volume_update = 0;
double worstAfter = 1.0;
double newQuals[2000];
if (toUpdate.size() >= 2000){
Msg::Error("Impossible to collapse vertex");
return false;
}
for (unsigned int i = 0; i < toUpdate.size(); i++){
double vv;
newQuals[i] = qmTetrahedron::qm(toUpdate[i]->tet(),cr,&vv);
worstAfter = std::min(worstAfter,newQuals[i]);
volume_update += vv;
}
// printf("%12.5E %12.5E %12.5E %12.5E %d\n",
// volume,volume_update,worstAfter,worst,toUpdate.size());
if (fabs(volume-volume_update) > 1.e-10 * volume || worstAfter < worst){
v->x() = x;
v->y() = y;
v->z() = z;
return false;
}
if (action == GMSH_EVALONLY){
*minQual = worstAfter;
return true;
}
// ok we collapse computeNeighboringTetsOfACavity(cavity_v, outside);
for (unsigned int i = 0; i < toUpdate.size(); i++){
MTetrahedron *tr1 = new MTetrahedron
(toUpdate[i]->tet()->getVertex(0) == v ? tg : toUpdate[i]->tet()->getVertex(0),
toUpdate[i]->tet()->getVertex(1) == v ? tg : toUpdate[i]->tet()->getVertex(1),
toUpdate[i]->tet()->getVertex(2) == v ? tg : toUpdate[i]->tet()->getVertex(2),
toUpdate[i]->tet()->getVertex(3) == v ? tg : toUpdate[i]->tet()->getVertex(3));
MTet4 *t41 = new MTet4(tr1, cr);
t41->setOnWhat(cavity_v[0]->onWhat());
t41->setQuality(newQuals[i]);
outside.push_back(t41);
newTets.push_back(t41);
}
for(unsigned int i = 0; i < cavity_v.size(); i++) cavity_v[i]->setDeleted(true);
connectTets(outside);
return true;
}
bool smoothVertex(MTet4 *t, int iVertex, const qmTetrahedron::Measures &cr)
{
if(t->isDeleted()){
Msg::Error("Impossible to collapse vertex");
return false;
}
if(t->tet()->getVertex(iVertex)->onWhat()->dim() < 3) return false;
std::vector<MTet4*> cavity;
cavity.push_back(t);
buildVertexCavity_recur(t, t->tet()->getVertex(iVertex), cavity);
double xcg = 0, ycg = 0, zcg = 0;
double vTot = 0;
double worst = 1.0;
for(unsigned int i = 0 ; i < cavity.size(); i++){
double volume = fabs(cavity[i]->tet()->getVolume());
double q = cavity[i]->getQuality();
worst = std::min(worst,q);
xcg += 0.25 * (cavity[i]->tet()->getVertex(0)->x() +
cavity[i]->tet()->getVertex(1)->x() +
cavity[i]->tet()->getVertex(2)->x() +
cavity[i]->tet()->getVertex(3)->x()) * volume;
ycg += 0.25 * (cavity[i]->tet()->getVertex(0)->y() +
cavity[i]->tet()->getVertex(1)->y() +
cavity[i]->tet()->getVertex(2)->y() +
cavity[i]->tet()->getVertex(3)->y()) * volume;
zcg += 0.25 * (cavity[i]->tet()->getVertex(0)->z() +
cavity[i]->tet()->getVertex(1)->z() +
cavity[i]->tet()->getVertex(2)->z() +
cavity[i]->tet()->getVertex(3)->z()) * volume;
vTot += volume;
}
xcg /= (vTot);
ycg /= (vTot);
zcg /= (vTot);
double volumeAfter = 0.0;
double x = t->tet()->getVertex(iVertex)->x();
double y = t->tet()->getVertex(iVertex)->y();
double z = t->tet()->getVertex(iVertex)->z();
t->tet()->getVertex(iVertex)->x() = xcg;
t->tet()->getVertex(iVertex)->y() = ycg;
t->tet()->getVertex(iVertex)->z() = zcg;
double worstAfter = 1.0;
double newQuals[2000];
if (cavity.size() >= 2000){
Msg::Error("Impossible to smooth vertex"); return false;
}
for (unsigned int i = 0; i < cavity.size(); i++){
double volume;
newQuals[i] = qmTetrahedron::qm(cavity[i]->tet(),cr,&volume);
volumeAfter += volume;
worstAfter = std::min(worstAfter,newQuals[i]);
}
if (fabs(volumeAfter-vTot) > 1.e-10 * vTot || worstAfter < worst){
t->tet()->getVertex(iVertex)->x() = x;
t->tet()->getVertex(iVertex)->y() = y;
t->tet()->getVertex(iVertex)->z() = z;
return false; // smoothVertexOptimize(t, iVertex, cr);
}
else{
// restore new quality
for(unsigned int i = 0; i < cavity.size(); i++){
cavity[i]->setQuality(newQuals[i]);
}
return true;
}
}
struct smoothVertexData3D{
MVertex *v;
std::vector<MTet4 *> ts;
double LC;
};
double smoothing_objective_function_3D(double X, double Y, double Z,
MVertex *v, std::vector<MTet4 *> &ts)
{
const double oldX = v->x();
const double oldY = v->y();
const double oldZ = v->z();
v->x() = X;
v->y() = Y;
v->z() = Z;
std::vector < MTet4 * >::iterator it = ts.begin();
std::vector < MTet4 * >::iterator ite = ts.end();
double qMin = 1, vol;
while(it != ite){
qMin = std::min(qmTetrahedron::qm((*it)->tet(), qmTetrahedron::QMTET_GAMMA, &vol), qMin);
++it;
}
v->x() = oldX;
v->y() = oldY;
v->z() = oldZ;
return -qMin;
}
void deriv_smoothing_objective_function_3D(double *XYZ, double *dF,
double &F, void *data)
{
smoothVertexData3D *svd = (smoothVertexData3D*)data;
MVertex *v = svd->v;
const double LARGE = svd->LC * 1.e5;
const double SMALL = 1. / LARGE;
F = smoothing_objective_function_3D(XYZ[0], XYZ[1], XYZ[2], v, svd->ts);
double F_X = smoothing_objective_function_3D
(XYZ[0] + SMALL, XYZ[1], XYZ[2], v, svd->ts);
double F_Y = smoothing_objective_function_3D
(XYZ[0], XYZ[1] + SMALL, XYZ[2], v, svd->ts);
double F_Z = smoothing_objective_function_3D
(XYZ[0], XYZ[1], XYZ[2] + SMALL, v, svd->ts);
dF[0] = (F_X - F) * LARGE;
dF[1] = (F_Y - F) * LARGE;
dF[2] = (F_Z - F) * LARGE;}
double smooth_obj_3D(double *XYZ, void *data)
{
smoothVertexData3D *svd = (smoothVertexData3D*)data;
return smoothing_objective_function_3D(XYZ[0], XYZ[1], XYZ[2], svd->v, svd->ts);
}
bool smoothVertexOptimize(MTet4 *t, int iVertex, const qmTetrahedron::Measures &cr)
{
if(t->tet()->getVertex(iVertex)->onWhat()->dim() < 3) return false;
smoothVertexData3D vd;
vd.ts.push_back(t);
vd.v = t->tet()->getVertex(iVertex);
vd.LC = 1.0; // WRONG
buildVertexCavity_recur(t, t->tet()->getVertex(iVertex), vd.ts);
double xyzopti[3] = {vd.v->x(), vd.v->y(), vd.v->z()};
//double val = 0.;
Msg::Error("Fletcher-Reeves minimizer routine must be reimplemented");
//minimize_N(3, smooth_obj_3D, deriv_smoothing_objective_function_3D, &vd, 4,
// xyzopti, val);
double vTot = 0;
for(unsigned int i = 0; i < vd.ts.size(); i++){
double volume = fabs(vd.ts[i]->tet()->getVolume());
vTot += volume;
}
double volumeAfter = 0.0;
double x = t->tet()->getVertex(iVertex)->x();
double y = t->tet()->getVertex(iVertex)->y();
double z = t->tet()->getVertex(iVertex)->z();
t->tet()->getVertex(iVertex)->x() = xyzopti[0];
t->tet()->getVertex(iVertex)->y() = xyzopti[1];
t->tet()->getVertex(iVertex)->z() = xyzopti[2];
double newQuals[2000];
if(vd.ts.size() >= 2000){
Msg::Error("Impossible to smooth vertex");
return false;
}
for(unsigned int i = 0; i < vd.ts.size(); i++){
double volume;
newQuals[i] = qmTetrahedron::qm(vd.ts[i]->tet(), cr, &volume);
volumeAfter += volume;
}
if(fabs(volumeAfter-vTot) > 1.e-10 * vTot){
t->tet()->getVertex(iVertex)->x() = x;
t->tet()->getVertex(iVertex)->y() = y;
t->tet()->getVertex(iVertex)->z() = z;
return false;
}
else{
// restore new quality
for(unsigned int i = 0; i < vd.ts.size(); i++){
vd.ts[i]->setQuality(newQuals[i]);
}
return true;
}
}
// Edge split sets ...
// Here, we only build a list of tets that are a subdivision// of the given
//static int edges[6][2] = {{0,1},{0,2},{0,3},{1,2},{1,3},{2,3}};
// the resulting triangles are 012 and 230 in vector res
// void splitPrism (std::vector<MTet4 *> &newTets,
// std::vector<MVertex *> &steinerPoints,
// MVertex* v1,
// MVertex* v2,
// MVertex* v3,
// MVertex* v4,
// MVertex* v5,
// MVertex* v6,
// const qualityMeasure4Tet &cr,
// MVertex *res[4],
// fs_cont &search,
// GFace *fakeFace){
// }
// void splitQuadFace (MVertex* newv1,
// MVertex* newv2,
// MVertex* v21,
// MVertex* v11,
// const qualityMeasure4Tet &cr,
// MVertex *res[4],
// fs_cont &search,
// GFace *fakeFace){
// GFace* gfound = findInFaceSearchStructure (newv1,newv2,v11,search);
// if (gfound){
// res[0] = newv2;
// res[1] = newv1;
// res[2] = v11;
// res[3] = v21;
// }
// else{
// GFace* gfound = findInFaceSearchStructure (newv1,newv2,v21,search);
// if (gfound){
// res[0] = newv1;
// res[1] = newv2;
// res[2] = v21;
// res[3] = v11;
// }
// // choose the best configuration
// else{
// double q1 = std::min(qmTri(newv1,newv2,v11,cr),qmTet(newv2,v11,v21,cr));
// double q2 = std::min(qmTet(newv1,newv2,v21,cr),qmTet(newv1,v11,v21,cr));
// if (q1 > q2){
// res[0] = newv2;
// res[1] = newv1;
// res[2] = v11;
// res[3] = v21;
// MVertex *p1 = std::min(std::min(newv1,newv2),v11);
// MVertex *p2 = std::min(std::min(newv2,v11),v21);
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p1, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,newv2,v11),fakeFace)));
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p2, std::pair<MTriangle*,GFace*>(new MTriangle(newv2,v11,v21),fakeFace)));
// }
// else{
// res[0] = newv1;
// res[1] = newv2;
// res[2] = v21;
// res[3] = v11;
// MVertex *p1 = std::min(std::min(newv1,newv2),v21);
// MVertex *p2 = std::min(std::min(newv2,v11),v21);
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p1, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,newv2,v21),fakeFace)));
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p2, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,v11,v21),fakeFace)));
// }
// }
// }
// }
// void splitQuadFace (std::vector<MTet4 *> &newTets,
// std::vector<MVertex *> &steinerPoints,// MVertex* newv1,
// MVertex* newv2,
// MVertex* v21,
// MVertex* v11,
// MVertex* other,
// const qualityMeasure4Tet &cr,
// fs_cont &search,
// GFace *fakeFace){
// MTetrahedron *tr3,*tr4;
// // now we look if there exists a face with the same vertices
// GFace* gfound = findInFaceSearchStructure (newv1,newv2,v11,search);
// if (gfound){
// tr3 = new MTetrahedron ( newv1,newv2,v11,other);
// tr4 = new MTetrahedron ( newv2,v11,v21,other);
// }
// else{
// GFace* gfound = findInFaceSearchStructure (newv1,newv2,v21,search);
// if (gfound){
// tr3 = new MTetrahedron ( newv1,newv2,v21,other);
// tr4 = new MTetrahedron ( newv1,v11,v21,other);
// }
// // choose the best configuration
// else{
// double vol;
// double q1 = std::min(qmTet(newv1,newv2,v11,other,cr,vol),qmTet(newv2,v11,v21,other,cr,vol));
// double q2 = std::min(qmTet(newv1,newv2,v21,other,cr,vol),qmTet(newv1,v11,v21,other,cr,vol));
// if (q1 > q2){
// tr3 = new MTetrahedron ( newv1,newv2,v11,other);
// tr4 = new MTetrahedron ( newv2,v11,v21,other);
// MVertex *p1 = std::min(std::min(newv1,newv2),v11);
// MVertex *p2 = std::min(std::min(newv2,v11),v21);
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p1, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,newv2,v11),fakeFace)));
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p2, std::pair<MTriangle*,GFace*>(new MTriangle(newv2,v11,v21),fakeFace)));
// }
// else{
// tr3 = new MTetrahedron ( newv1,newv2,v21,other);
// tr4 = new MTetrahedron ( newv1,v11,v21,other);
// MVertex *p1 = std::min(std::min(newv1,newv2),v21);
// MVertex *p2 = std::min(std::min(newv2,v11),v21);
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p1, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,newv2,v21),fakeFace)));
// search.insert ( std::pair<MVertex*,std::pair<MTriangle*,GFace*> > ( p2, std::pair<MTriangle*,GFace*>(new MTriangle(newv1,v11,v21),fakeFace)));
// }
// }
// }
// }
// bool splitEdgesOfTet (std::vector<MTet4 *> &newTets,
// std::vector<MVertex *> &steinerPoints,
// MTet4 *t1,
// int nbEdges,
// int e[6],
// MVertex* pts[6],
// const qualityMeasure4Tet &cr,
// fs_cont &search,
// GFace *fakeFace){
// switch(nbEdges){
// case 1 :
// {
// int iE = edges[0];
// MVertex *newv = pts[0];
// MVertex *v1 = t1->tet()->getVertex(e[iE][0]);
// MVertex *v2 = t1->tet()->getVertex(e[iE][1]);
// int oE = 5-iE;
// MVertex *o1 = t1->tet()->getVertex(e[oE][0]);
// MVertex *o2 = t1->tet()->getVertex(e[oE][1]);
// MTetrahedron *tr1 = new MTetrahedron ( newv,v1,o1,o2);
// MTetrahedron *tr2 = new MTetrahedron ( newv,v2,o2,o1);
// MTet4 *t41 = new MTet4 (tr1,cr);
// MTet4 *t42 = new MTet4 (tr2,cr);
// newTets.push_back(t41);// newTets.push_back(t42);
// }
// break;
// case 2 :
// {
// int iE1 = edges[0];
// int iE2 = edges[1];
// MVertex *newv1 = pts[0];
// MVertex *newv2 = pts[1];
// MVertex *v11 = t1->tet()->getVertex(e[iE1][0]);
// MVertex *v12 = t1->tet()->getVertex(e[iE1][1]);
// MVertex *v21 = t1->tet()->getVertex(e[iE2][0]);
// MVertex *v22 = t1->tet()->getVertex(e[iE2][1]);
// if (iE1 == 5-iE2){ // two opposite edges
// MTetrahedron *tr1 = new MTetrahedron ( newv1,newv2,v11,v21);
// MTetrahedron *tr2 = new MTetrahedron ( newv1,newv2,v21,v12);
// MTetrahedron *tr3 = new MTetrahedron ( newv1,newv2,v12,v22);
// MTetrahedron *tr4 = new MTetrahedron ( newv1,newv2,v22,v11);
// MTet4 *t41 = new MTet4 (tr1,cr);
// MTet4 *t42 = new MTet4 (tr2,cr);
// MTet4 *t43 = new MTet4 (tr3,cr);
// MTet4 *t44 = new MTet4 (tr4,cr);
// newTets.push_back(t41);
// newTets.push_back(t42);
// newTets.push_back(t43);
// newTets.push_back(t44);
// }
// else{ //two adjacend edges
// MVertex *vsame,*other=0;
// if (v11 == v21){vsame=v11; v11=v12; v21=v22;}
// else if (v11 == v22){vsame=v11; v11=v12}
// else if (v12 == v21){vsame=v12; v21=v22}
// else if (v12 == v22){vsame=v12;}
// else throw;
// for (int i=0;i<4;i++){
// if (vsame != t1->tet()->getVertex(i) &&
// v11 != t1->tet()->getVertex(i) &&
// v21 != t1->tet()->getVertex(i)){
// other = t1->tet->getVertex(i);
// break;
// }
// }
// if (!other)throw;
// MTetrahedron *tr1 = new MTetrahedron ( newv1,newv2,vsame,other);
// splitQuadFace (newTets,steinerPoints,newv1,newv2,v21,v11,other,cr,search,fakeFace);
// }
// }
// break;
// case 3 :
// {
// int iE1 = edges[0];
// int iE2 = edges[1];
// int iE3 = edges[2];
// MVertex *newv1;
// MVertex *newv2;
// MVertex *newv3;
// std::sort(edges,edges+3);
// if (iE1 == edges[0])newv1=pts[0];
// else if (iE2 == edges[0])newv1=pts[1];
// else if (iE3 == edges[0])newv1=pts[2];
// if (iE1 == edges[1])newv2=pts[0];
// else if (iE2 == edges[1])newv2=pts[1];
// else if (iE3 == edges[1])newv2=pts[2];
// if (iE1 == edges[2])newv3=pts[0];
// else if (iE2 == edges[2])newv3=pts[1];
// else if (iE3 == edges[2])newv3=pts[2];
// iE1 = edges[0];// iE2 = edges[1];
// iE3 = edges[2];
// // edges are sorted and points correspond
// mVertex *v[4];
// // the 3 edges coincide at one vertex
// int config;
// if (iE1 == 0 && iE2 == 1 && iE3 == 2){
// config = 1;
// v[0] = t1->tet()->getVertex(0);
// v[1] = t1->tet()->getVertex(1);
// v[2] = t1->tet()->getVertex(2);
// v[3] = t1->tet()->getVertex(3);
// }
// else if (iE1 == 0 && iE2 == 3 && iE3 == 4){
// config = 1;
// v[0] = t1->tet()->getVertex(1);
// v[1] = t1->tet()->getVertex(0);
// v[2] = t1->tet()->getVertex(2);
// v[3] = t1->tet()->getVertex(3);
// }
// else if (iE1 == 1 && iE2 == 3 && iE3 == 5){
// config = 1;
// v[0] = t1->tet()->getVertex(2);
// v[1] = t1->tet()->getVertex(0);
// v[2] = t1->tet()->getVertex(1);
// v[3] = t1->tet()->getVertex(3);
// }
// else if (iE1 == 2 && iE2 == 4 && iE3 == 5){
// config = 1;
// v[0] = t1->tet()->getVertex(3);
// v[1] = t1->tet()->getVertex(0);
// v[2] = t1->tet()->getVertex(1);
// v[3] = t1->tet()->getVertex(2);
// }
// // three edges of the same face are cut
// else if (iE1 == 0 && iE2 == 1 && iE3 == 3){
// config = 2;
// v[0] = t1->tet()->getVertex(3);
// v[1] = t1->tet()->getVertex(1);
// v[2] = t1->tet()->getVertex(0);
// v[3] = t1->tet()->getVertex(2);
// }
// else if (iE1 == 0 && iE2 == 2 && iE3 == 4){
// config = 2;
// v[0] = t1->tet()->getVertex(2);
// v[1] = t1->tet()->getVertex(1);
// v[2] = t1->tet()->getVertex(0);
// v[3] = t1->tet()->getVertex(3);
// }
// else if (iE1 == 1 && iE2 == 2 && iE3 == 5){
// config = 2;
// v[0] = t1->tet()->getVertex(1);
// v[1] = t1->tet()->getVertex(2);
// v[2] = t1->tet()->getVertex(0);
// v[3] = t1->tet()->getVertex(3);
// }
// else if (iE1 == 3 && iE2 == 4 && iE3 == 5){
// config = 2;
// v[0] = t1->tet()->getVertex(0);
// v[1] = t1->tet()->getVertex(2);
// v[2] = t1->tet()->getVertex(1);
// v[3] = t1->tet()->getVertex(3);
// }
// // the three edges for a kind of Z
// else if (iE1 == 0 && iE2 == 3 && iE3 == 5){
// config = 3;
// }
// if (config == 1){// }
// else if (config == 2){
// }
// else{
// throw; // for the moment.
// }
// }
// default :
// throw;
// }
// t1->setDeleted(true);
// }
// collapse