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Commit 13597897 authored by Ludovic Noels's avatar Ludovic Noels
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working on dragon

parent 1ef6cdfb
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#!/bin/sh #!/bin/sh
# script example for dragon1 # script example for dragon1
#SBATCH --job-name taylorTetDGDynPart4 #SBATCH --job-name taylorMPI
#SBATCH --mail-user=l.noels@ulg.ac.be #SBATCH --mail-user=l.noels@ulg.ac.be
#SBATCH --mail-type=ALL #SBATCH --mail-type=ALL
#SBATCH --output="out.txt" #SBATCH --output="out.txt"
...@@ -10,17 +10,17 @@ ...@@ -10,17 +10,17 @@
#SBATCH --time=0:20:0 #SBATCH --time=0:20:0
module load openmpi/1.6.1/gnu64-4.7.3 module load openmpi/1.6.5/gnu64
SUBDIR=$HOME/gmsh/projects/dG3D/benchmarks/taylor SUBDIR=$HOME/gmsh/projects/cm3Libraries/dG3D/benchmarks/taylorMPI
echo "subdir=" $SUBDIR echo "subdir=" $SUBDIR
SCRATCH=/scratch/${USER}_$SLURM_JOB_ID SCRATCH=/scratch/${USER}_$SLURM_JOB_ID
echo "workdir=" $SCRATCH echo "workdir=" $SCRATCH
pyfile=taylorTetDGDynPart4.py pyfile=taylorCG.py
mshfile=taylorTetPart4.msh mshfile=taylor.msh
echo "node list of job" >> $SUBDIR/output.po$SLURM_JOB_ID echo "node list of job" >> $SUBDIR/output.po$SLURM_JOB_ID
srun hostname >> $SUBDIR/output.po$SLURM_JOB_ID srun hostname >> $SUBDIR/output.po$SLURM_JOB_ID
...@@ -32,14 +32,14 @@ srun cp $SUBDIR/$mshfile $SCRATCH/ || exit $? ...@@ -32,14 +32,14 @@ srun cp $SUBDIR/$mshfile $SCRATCH/ || exit $?
cd $SCRATCH # needed to work in the tmpscrach dir otherwise work on home !! cd $SCRATCH # needed to work in the tmpscrach dir otherwise work on home !!
#ls -artl #ls -artl
export PETSC_DIR=$HOME/local/petsc-3.3-p7 export PETSC_DIR=$HOME/local/petsc-3.6.4
export PETSC_ARCH=linux-gnu-c-opt export PETSC_ARCH=linux-gnu-c-opt
export PATH=$HOME/local/bin:$PATH export PATH=$HOME/local/bin:$PATH
export PATH=$PATH:$HOME/gmsh/projects/dG3D/release export PATH=$PATH:$HOME/gmsh/projects/cm3LibrariesdG3D/release
export PATH=$PATH:$HOME/gmsh/projects/dG3D/release/NonLinearSolver/gmsh export PATH=$PATH:$HOME/gmsh/projects/cm3Libraries/dG3D/release/NonLinearSolver/gmsh
export PYTHONPATH=$PYTHONPATH:$HOME/gmsh/projects/dG3D/release:$HOME/gmsh/projects/dG3D/release/NonLinearSolver/gmsh/wrappers export PYTHONPATH=$PYTHONPATH:$HOME/gmsh/projects/cm3Libraries/dG3D/release:$HOME/gmsh/projects/cm3Libraries/dG3D/release/NonLinearSolver/gmsh/wrappers
mpirun python $SCRATCH/$pyfile >& $SCRATCH/output.txt mpirun python $SCRATCH/$pyfile >& $SCRATCH/output.txt
......
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