// $Id: Extract.cpp,v 1.23 2007-05-04 10:45:08 geuzaine Exp $ // // Copyright (C) 1997-2007 C. Geuzaine, J.-F. Remacle // // This program is free software; you can redistribute it and/or modify // it under the terms of the GNU General Public License as published by // the Free Software Foundation; either version 2 of the License, or // (at your option) any later version. // // This program is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the // GNU General Public License for more details. // // You should have received a copy of the GNU General Public License // along with this program; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 // USA. // // Please report all bugs and problems to <gmsh@geuz.org>. #include "Plugin.h" #include "Extract.h" #include "List.h" #include "Views.h" #include "Context.h" #include "Malloc.h" #if defined(HAVE_MATH_EVAL) #include "matheval.h" #endif extern Context_T CTX; StringXNumber ExtractOptions_Number[] = { {GMSH_FULLRC, "TimeStep", NULL, -1.}, {GMSH_FULLRC, "iView", NULL, -1.} }; StringXString ExtractOptions_String[] = { #if defined(HAVE_MATH_EVAL) {GMSH_FULLRC, "Expression0", NULL, "Sqrt(v0^2+v1^2+v2^2)"}, #else {GMSH_FULLRC, "Expression0", NULL, "v0"}, #endif {GMSH_FULLRC, "Expression1", NULL, ""}, {GMSH_FULLRC, "Expression2", NULL, ""}, {GMSH_FULLRC, "Expression3", NULL, ""}, {GMSH_FULLRC, "Expression4", NULL, ""}, {GMSH_FULLRC, "Expression5", NULL, ""}, {GMSH_FULLRC, "Expression6", NULL, ""}, {GMSH_FULLRC, "Expression7", NULL, ""}, {GMSH_FULLRC, "Expression8", NULL, ""} }; extern "C" { GMSH_Plugin *GMSH_RegisterExtractPlugin() { return new GMSH_ExtractPlugin(); } } GMSH_ExtractPlugin::GMSH_ExtractPlugin() { ; } void GMSH_ExtractPlugin::getName(char *name) const { strcpy(name, "Extract"); } void GMSH_ExtractPlugin::getInfos(char *author, char *copyright, char *help_text) const { strcpy(author, "C. Geuzaine"); strcpy(copyright, "DGR (www.multiphysics.com)"); strcpy(help_text, "Plugin(Extract) extracts a combination of\n" "components from the `TimeStep'th time step\n" "in the view `iView'. If only `Expression0' is\n" "given (and `Expression1', ..., `Expression8' are\n" "all empty), the plugin creates a scalar view.\n" "If `Expression0', `Expression1' and/or\n" "`Expression2' are given (and `Expression3',\n" "..., `Expression8' are all empty) the plugin\n" "creates a vector view. Otherwise the plugin\n" "creates a tensor view. In addition to the usual\n" "mathematical functions (Exp, Log, Sqrt, Sin, Cos,\n" "Fabs, etc.) and operators (+, -, *, /, ^), all\n" "expressions can contain the symbols v0, v1, v2,\n" " ..., vn, which represent the n components of the\n" "field, and the symbols x, y and z, which represent\n" "the three spatial coordinates. If `TimeStep' < 0,\n" "the plugin extracts data from all the time steps\n" "in the view. If `iView' < 0, the plugin is run on\n" "the current view.\n" "\n" "Plugin(Extract) creates one new view.\n"); } int GMSH_ExtractPlugin::getNbOptions() const { return sizeof(ExtractOptions_Number) / sizeof(StringXNumber); } StringXNumber *GMSH_ExtractPlugin::getOption(int iopt) { return &ExtractOptions_Number[iopt]; } int GMSH_ExtractPlugin::getNbOptionsStr() const { return sizeof(ExtractOptions_String) / sizeof(StringXString); } StringXString *GMSH_ExtractPlugin::getOptionStr(int iopt) { return &ExtractOptions_String[iopt]; } void GMSH_ExtractPlugin::catchErrorMessage(char *errorMessage) const { strcpy(errorMessage, "Extract failed..."); } static void extract(char *expr[9], List_T *inList, int inNb, List_T *outListScalar, int *outNbScalar, List_T *outListVector, int *outNbVector, List_T *outListTensor, int *outNbTensor, int timeStep, int nbNod, int nbComp) { if(!inNb) return; int outNbComp, *outNb; List_T *outList; if(strlen(expr[3]) || strlen(expr[4]) || strlen(expr[5]) || strlen(expr[6]) || strlen(expr[7]) || strlen(expr[8])){ outNbComp = 9; outNb = outNbTensor; outList = outListTensor; for(int i = 0; i < 9; i++) if(!strlen(expr[i])) expr[i] = "0"; } else if(strlen(expr[1]) || strlen(expr[2])){ outNbComp = 3; outNb = outNbVector; outList = outListVector; for(int i = 0; i < 3; i++) if(!strlen(expr[i])) expr[i] = "0"; } else{ outNbComp = 1; outNb = outNbScalar; outList = outListScalar; } // if we have MathEval, we can evaluate arbitrary expressions; // otherwise, we only allow to extract single components #if defined(HAVE_MATH_EVAL) void *f[9] = { NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL }; for(int i = 0; i < outNbComp; i++){ f[i] = evaluator_create(expr[i]); if(!f[i]){ Msg(GERROR, "Invalid expression '%s'", expr[i]); for(int j = 0; j < i; j++) if(f[j]) evaluator_destroy(f[j]); return; } } #else int comp[9] = { 0, 0, 0, 0, 0, 0, 0, 0, 0 }; for(int i = 0; i < outNbComp; i++){ if (!strcmp(expr[i], "v0")) comp[i] = 0; else if(!strcmp(expr[i], "v1")) comp[i] = 1; else if(!strcmp(expr[i], "v2")) comp[i] = 2; else if(!strcmp(expr[i], "v3")) comp[i] = 3; else if(!strcmp(expr[i], "v4")) comp[i] = 4; else if(!strcmp(expr[i], "v5")) comp[i] = 5; else if(!strcmp(expr[i], "v6")) comp[i] = 6; else if(!strcmp(expr[i], "v7")) comp[i] = 7; else if(!strcmp(expr[i], "v8")) comp[i] = 8; else{ Msg(GERROR, "Invalid expression '%s'", expr[i]); return; } } #endif int timeBeg = (timeStep < 0) ? 0 : timeStep; int timeEnd = (timeStep < 0) ? -timeStep : timeStep + 1; int nb = List_Nbr(inList) / inNb; for(int i = 0; i < List_Nbr(inList); i += nb) { double *x = (double *)List_Pointer_Fast(inList, i); double *y = (double *)List_Pointer_Fast(inList, i + nbNod); double *z = (double *)List_Pointer_Fast(inList, i + 2 * nbNod); for(int j = 0; j < 3 * nbNod; j++) List_Add(outList, List_Pointer_Fast(inList, i + j)); for(int j = timeBeg; j < timeEnd; j++){ for(int k = 0; k < nbNod; k++){ double xx = x[k]; double yy = y[k]; double zz = z[k]; double d[9] = {0., 0., 0., 0., 0., 0., 0., 0., 0.}; for(int l = 0; l < nbComp; l++) List_Read(inList, i + 3 * nbNod + nbNod * nbComp * j + nbComp * k + l, &d[l]); for(int l = 0; l < outNbComp; l++){ #if defined(HAVE_MATH_EVAL) char *names[] = { "x", "y", "z", "v0", "v1", "v2", "v3", "v4", "v5", "v6", "v7", "v8" }; double values[] = { xx, yy, zz, d[0], d[1], d[2], d[3], d[4], d[5], d[6], d[7], d[8] }; double res = evaluator_evaluate(f[l], sizeof(names)/sizeof(names[0]), names, values); #else double res = d[comp[l]]; #endif List_Add(outList, &res); } } } (*outNb)++; } #if defined(HAVE_MATH_EVAL) for(int i = 0; i < outNbComp; i++) evaluator_destroy(f[i]); #endif } Post_View *GMSH_ExtractPlugin::execute(Post_View * v) { int step = (int)ExtractOptions_Number[0].def; int iView = (int)ExtractOptions_Number[1].def; char *expr[9] = { ExtractOptions_String[0].def, ExtractOptions_String[1].def, ExtractOptions_String[2].def, ExtractOptions_String[3].def, ExtractOptions_String[4].def, ExtractOptions_String[5].def, ExtractOptions_String[6].def, ExtractOptions_String[7].def, ExtractOptions_String[8].def }; if(iView < 0) iView = v ? v->Index : 0; if(!List_Pointer_Test(CTX.post.list, iView)) { Msg(GERROR, "View[%d] does not exist", iView); return v; } Post_View *v1 = *(Post_View **)List_Pointer(CTX.post.list, iView); Post_View *v2 = BeginView(1); if(step < 0){ step = - v1->NbTimeStep; } else if(step > v1->NbTimeStep-1){ Msg(GERROR, "Invalid time step (%d) in View[%d]: using all steps instead", step, v1->Num); step = - v1->NbTimeStep; } // points extract(expr, v1->SP, v1->NbSP, v2->SP, &v2->NbSP, v2->VP, &v2->NbVP, v2->TP, &v2->NbTP, step, 1, 1); extract(expr, v1->VP, v1->NbVP, v2->SP, &v2->NbSP, v2->VP, &v2->NbVP, v2->TP, &v2->NbTP, step, 1, 3); extract(expr, v1->TP, v1->NbTP, v2->SP, &v2->NbSP, v2->VP, &v2->NbVP, v2->TP, &v2->NbTP, step, 1, 9); // lines extract(expr, v1->SL, v1->NbSL, v2->SL, &v2->NbSL, v2->VL, &v2->NbVL, v2->TL, &v2->NbTL, step, 2, 1); extract(expr, v1->VL, v1->NbVL, v2->SL, &v2->NbSL, v2->VL, &v2->NbVL, v2->TL, &v2->NbTL, step, 2, 3); extract(expr, v1->TL, v1->NbTL, v2->SL, &v2->NbSL, v2->VL, &v2->NbVL, v2->TL, &v2->NbTL, step, 2, 9); // triangles extract(expr, v1->ST, v1->NbST, v2->ST, &v2->NbST, v2->VT, &v2->NbVT, v2->TT, &v2->NbTT, step, 3, 1); extract(expr, v1->VT, v1->NbVT, v2->ST, &v2->NbST, v2->VT, &v2->NbVT, v2->TT, &v2->NbTT, step, 3, 3); extract(expr, v1->TT, v1->NbTT, v2->ST, &v2->NbST, v2->VT, &v2->NbVT, v2->TT, &v2->NbTT, step, 3, 9); // quadrangles extract(expr, v1->SQ, v1->NbSQ, v2->SQ, &v2->NbSQ, v2->VQ, &v2->NbVQ, v2->TQ, &v2->NbTQ, step, 4, 1); extract(expr, v1->VQ, v1->NbVQ, v2->SQ, &v2->NbSQ, v2->VQ, &v2->NbVQ, v2->TQ, &v2->NbTQ, step, 4, 3); extract(expr, v1->TQ, v1->NbTQ, v2->SQ, &v2->NbSQ, v2->VQ, &v2->NbVQ, v2->TQ, &v2->NbTQ, step, 4, 9); // tets extract(expr, v1->SS, v1->NbSS, v2->SS, &v2->NbSS, v2->VS, &v2->NbVS, v2->TS, &v2->NbTS, step, 4, 1); extract(expr, v1->VS, v1->NbVS, v2->SS, &v2->NbSS, v2->VS, &v2->NbVS, v2->TS, &v2->NbTS, step, 4, 3); extract(expr, v1->TS, v1->NbTS, v2->SS, &v2->NbSS, v2->VS, &v2->NbVS, v2->TS, &v2->NbTS, step, 4, 9); // hexas extract(expr, v1->SH, v1->NbSH, v2->SH, &v2->NbSH, v2->VH, &v2->NbVH, v2->TH, &v2->NbTH, step, 8, 1); extract(expr, v1->VH, v1->NbVH, v2->SH, &v2->NbSH, v2->VH, &v2->NbVH, v2->TH, &v2->NbTH, step, 8, 3); extract(expr, v1->TH, v1->NbTH, v2->SH, &v2->NbSH, v2->VH, &v2->NbVH, v2->TH, &v2->NbTH, step, 8, 9); // prisms extract(expr, v1->SI, v1->NbSI, v2->SI, &v2->NbSI, v2->VI, &v2->NbVI, v2->TI, &v2->NbTI, step, 6, 1); extract(expr, v1->VI, v1->NbVI, v2->SI, &v2->NbSI, v2->VI, &v2->NbVI, v2->TI, &v2->NbTI, step, 6, 3); extract(expr, v1->TI, v1->NbTI, v2->SI, &v2->NbSI, v2->VI, &v2->NbVI, v2->TI, &v2->NbTI, step, 6, 9); // pyramids extract(expr, v1->SY, v1->NbSY, v2->SY, &v2->NbSY, v2->VY, &v2->NbVY, v2->TY, &v2->NbTY, step, 5, 1); extract(expr, v1->VY, v1->NbVY, v2->SY, &v2->NbSY, v2->VY, &v2->NbVY, v2->TY, &v2->NbTY, step, 5, 3); extract(expr, v1->TY, v1->NbTY, v2->SY, &v2->NbSY, v2->VY, &v2->NbVY, v2->TY, &v2->NbTY, step, 5, 9); // copy time data if(step < 0) for(int i = 0; i < List_Nbr(v1->Time); i++) List_Add(v2->Time, List_Pointer(v1->Time, i)); else List_Add(v2->Time, List_Pointer(v1->Time, step)); // finalize char name[1024], filename[1024]; sprintf(name, "%s_Extract", v1->Name); sprintf(filename, "%s_Extract.pos", v1->Name); EndView(v2, 1, filename, name); return v2; }